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   -> Python知识库 -> 百度飞浆图像分割课程 作业2:basic_seg_loss.py、basic_train.py、fcn8s.py -> 正文阅读

[Python知识库]百度飞浆图像分割课程 作业2:basic_seg_loss.py、basic_train.py、fcn8s.py

在这里插入图片描述
代码列表:
在这里插入图片描述
1. utils.py

class AverageMeter(object):
    def __init__(self):
        self.reset()

    def reset(self):
        self.total = 0
        self.avg = 0
        self.cnt = 0

    def update(self, val, n=1):
        self.cnt += n
        self.total += val * n
        self.avg = self.total / self.cnt

2. vgg.py

import numpy as np
import paddle.fluid as fluid
from paddle.fluid.dygraph import to_variable
from paddle.fluid.dygraph import Conv2D
from paddle.fluid.dygraph import Dropout
from paddle.fluid.dygraph import BatchNorm
from paddle.fluid.dygraph import Pool2D
from paddle.fluid.dygraph import Linear

model_path = {
        #'vgg16': './vgg16',
        'vgg16bn': './vgg16_bn',
        # 'vgg19': './vgg19',
        # 'vgg19bn': './vgg19_bn'
        }

class ConvBNLayer(fluid.dygraph.Layer):
    def __init__(self,
                 num_channels,
                 num_filters,
                 filter_size=3,
                 stride=1,
                 groups=1,
                 use_bn=True,
                 act='relu',
                 name=None):
        super(ConvBNLayer, self).__init__(name)

        self.use_bn = use_bn
        if use_bn:
            self.conv = Conv2D(num_channels=num_channels,
                                num_filters=num_filters,
                                filter_size=filter_size,
                                stride=stride,
                                padding=(filter_size-1)//2,
                                groups=groups,
                                act=None,
                                bias_attr=None)
            self.bn = BatchNorm(num_filters, act=act)
        else:
            self.conv = Conv2D(num_channels=num_channels,
                                num_filters=num_filters,
                                filter_size=filter_size,
                                stride=stride,
                                padding=(filter_size-1)//2,
                                groups=groups,
                                act=act,
                                bias_attr=None)

    def forward(self, inputs):
        y = self.conv(inputs)
        if self.use_bn:
            y = self.bn(y)
        return y



class VGG(fluid.dygraph.Layer):
    def __init__(self, layers=16, use_bn=False, num_classes=1000):
        super(VGG, self).__init__()
        self.layers = layers
        self.use_bn = use_bn
        supported_layers = [16, 19]
        assert layers in supported_layers

        if layers == 16:
            depth = [2, 2, 3, 3, 3]
        elif layers == 19:
            depth = [2, 2, 4, 4, 4]

        num_channels = [3, 64, 128, 256, 512]
        num_filters = [64, 128, 256, 512, 512]

        self.layer1 = fluid.dygraph.Sequential(*self.make_layer(num_channels[0], num_filters[0], depth[0], use_bn, name='layer1'))
        self.layer2 = fluid.dygraph.Sequential(*self.make_layer(num_channels[1], num_filters[1], depth[1], use_bn, name='layer2'))
        self.layer3 = fluid.dygraph.Sequential(*self.make_layer(num_channels[2], num_filters[2], depth[2], use_bn, name='layer3'))
        self.layer4 = fluid.dygraph.Sequential(*self.make_layer(num_channels[3], num_filters[3], depth[3], use_bn, name='layer4'))
        self.layer5 = fluid.dygraph.Sequential(*self.make_layer(num_channels[4], num_filters[4], depth[4], use_bn, name='layer5'))

        self.classifier = fluid.dygraph.Sequential(
                Linear(input_dim=512 * 7 * 7, output_dim=4096, act='relu'),
                Dropout(),
                Linear(input_dim=4096, output_dim=4096, act='relu'),
                Dropout(),
                Linear(input_dim=4096, output_dim=num_classes))
                
        self.out_dim = 512 * 7 * 7


    def forward(self, inputs):
        x = self.layer1(inputs)
        x = fluid.layers.pool2d(x, pool_size=2, pool_stride=2)
        x = self.layer2(x)
        x = fluid.layers.pool2d(x, pool_size=2, pool_stride=2)
        x = self.layer3(x)
        x = fluid.layers.pool2d(x, pool_size=2, pool_stride=2)
        x = self.layer4(x)
        x = fluid.layers.pool2d(x, pool_size=2, pool_stride=2)
        x = self.layer5(x)
        x = fluid.layers.pool2d(x, pool_size=2, pool_stride=2)
        x = fluid.layers.adaptive_pool2d(x, pool_size=(7,7), pool_type='avg')
        x = fluid.layers.reshape(x, shape=[-1, self.out_dim])
        x = self.classifier(x)

        return x

    def make_layer(self, num_channels, num_filters, depth, use_bn, name=None):
        layers = []
        layers.append(ConvBNLayer(num_channels, num_filters, use_bn=use_bn, name=f'{name}.0'))
        for i in range(1, depth):
            layers.append(ConvBNLayer(num_filters, num_filters, use_bn=use_bn, name=f'{name}.{i}'))
        return layers


# def VGG16(pretrained=False):
#     model = VGG(layers=16)
#     if pretrained:
#         model_dict, _ = fluid.load_dygraph(model_path['vgg16'])
#         model.set_dict(model_dict)
#     return model

def VGG16BN(pretrained=False):
    model = VGG(layers=16, use_bn=True)
    if pretrained:
        model_dict, _ = fluid.load_dygraph(model_path['vgg16bn'])
        model.set_dict(model_dict)
    return model

# def VGG19(pretrained=False):
#     model =  VGG(layers=19)
#     if pretrained:
#         model_dict, _ = fluid.load_dygraph(model_path['vgg19'])
#         model.set_dict(model_dict)
#     return model

# def VGG19BN(pretrained=False):
#     model =  VGG(layers=19, use_bn=True)
#     if pretrained:
#         model_dict, _ = fluid.load_dygraph(model_path['vgg19bn'])
#         model.set_dict(model_dict)
#     return model



def main():
    with fluid.dygraph.guard():
        x_data = np.random.rand(2, 3, 224, 224).astype(np.float32)
        x = to_variable(x_data)

        # model = VGG16()
        # model.eval()
        # pred = model(x)
        # print('vgg16: pred.shape = ', pred.shape)

        model = VGG16BN()
        model.eval()
        pred = model(x)
        print('vgg16bn: pred.shape = ', pred.shape)

        # model = VGG19()
        # model.eval()
        # pred = model(x)
        # print('vgg19: pred.shape = ', pred.shape)

        # model = VGG19BN()
        # model.eval()
        # pred = model(x)
        # print('vgg19bn: pred.shape = ', pred.shape)

if __name__ == "__main__":
    main()

3. basic_transforms.py

import cv2
import numpy as np


class Compose(object):
    def __init__(self, transforms):
        self.transforms = transforms
    def __call__(self, image, label=None):
        for t in self.transforms:
            image, label = t(image, label)
        return image, label


class Normalize(object):
    def __init__(self, mean_val, std_val, val_scale=1):
        # set val_scale = 1 if mean and std are in range (0,1)
        # set val_scale to other value, if mean and std are in range (0,255)
        self.mean = np.array(mean_val, dtype=np.float32)
        self.std = np.array(std_val, dtype=np.float32)
        self.val_scale = 1/255.0 if val_scale==1 else 1
    def __call__(self, image, label=None):
        image = image.astype(np.float32)
        image = image * self.val_scale
        image = image - self.mean
        image = image * (1 / self.std)
        return image, label


class ConvertDataType(object):
    def __call__(self, image, label=None):
        if label is not None:
            label = label.astype(np.int64)
        return image.astype(np.float32), label


class Pad(object):
    def __init__(self, size, ignore_label=255, mean_val=0, val_scale=1):
        # set val_scale to 1 if mean_val is in range (0, 1)
        # set val_scale to 255 if mean_val is in range (0, 255) 
        factor = 255 if val_scale == 1 else 1

        self.size = size
        self.ignore_label = ignore_label
        self.mean_val=mean_val
        # from 0-1 to 0-255
        if isinstance(self.mean_val, (tuple,list)):
            self.mean_val = [int(x* factor) for x in self.mean_val]
        else:
            self.mean_val = int(self.mean_val * factor)


    def __call__(self, image, label=None):
        h, w, c = image.shape
        pad_h = max(self.size - h, 0)
        pad_w = max(self.size - w, 0)

        pad_h_half = int(pad_h / 2)
        pad_w_half = int(pad_w / 2)

        if pad_h > 0 or pad_w > 0:

            image = cv2.copyMakeBorder(image,
                                       top=pad_h_half,
                                       left=pad_w_half,
                                       bottom=pad_h - pad_h_half,
                                       right=pad_w - pad_w_half,
                                       borderType=cv2.BORDER_CONSTANT,
                                       value=self.mean_val)
            if label is not None:
                label = cv2.copyMakeBorder(label,
                                           top=pad_h_half,
                                           left=pad_w_half,
                                           bottom=pad_h - pad_h_half,
                                           right=pad_w - pad_w_half,
                                           borderType=cv2.BORDER_CONSTANT,
                                           value=self.ignore_label)
        return image, label

# TODO
class CenterCrop(object):
    def __init__(self, crop_size):
        self.crop_h = crop_size
        self.crop_w = crop_size

    def __call__(self, image, label = None):
        h, w, c = image.shape
        top = (h - self.crop_h) // 2
        left = (w - self.crop_w) // 2
        image = image[top:top+self.crop_h, left:left+self.crop_w,:]
        if label is not None:
            label = label[top:top+self.crop_h, left:left+self.crop_w,:]
        return image, label

# TODO
class Resize(object):
    def __init__(self, size):
        self.size = size
    def __call__(self, image, label=None):
        image = cv2.resize(image, (self.size, self.size), interpolation=cv2.INTER_LINEAR)
        if label is not None:
            label = cv2.resize(label, (self.size, self.size), interpolation=cv2.INTER_NEAREST)
        return image,label

# TODO
class RandomFlip(object):
    def __call__(self, image, label = None):
        prob_of_filp = np.random.rand()
        if prob_of_filp > 0.5:
            image = cv2.flip(image, 1)
            if label is not None:
                label = cv2.flip(label,1)
        return image, label


# TODO
class RandomCrop(object):
    def __init__(self, crop_size):
       self.crop_size = crop_size
    def __call__(self, image, label = None):
        h, w, c = image.shape
        top = np.random.uniform(h-self.crop_size)
        left = np.random.uniform(w-self.crop_size)
        assert top >= 0, "Error: crop_size > image height!"
        assert left >= 0, "Error: crop_size > image width!"

        rect = np.array([int(left),
                         int(top),
                         int(left + self.crop_size),
                         int(top + self.crop_size)])
        
        image = image[rect[1]:rect[3], rect[0]:rect[2], :]

        if label is not None:
            label = label[rect[1]:rect[3], rect[0]:rect[2], :]
        return image,label

# # TODO
class Scale(object):
    def __call__(self, image, label=None, scale=1.0):
        if not isinstance(scale,(list,tuple)):
            scale = [scale, scale]
        h, w, c = image.shape
        image = cv2.resize(image,
                            (int(w*scale[0]),int(h*scale[1])),
                            interpolation=cv2.INTER_LINEAR)
        if label is not None:
            label = cv2.resize(label,
                            (int(w*scale[0]),int(h*scale[1])),
                            interpolation=cv2.INTER_NEAREST)
        return image,label

# TODO
class RandomScale(object):
    def __init__(self, min_scale=0.5, max_scale=2.0, step=0.25):
        self.min_scale = min_scale
        self.max_scale = max_scale
        self.step = step
        self.scale = Scale()

    def __call__(self, image, label=None, scale=1.0):
        if self.step == 0:
            self.random_scale = np.random.rand.uniform(self.min_scale,
                                                        self.max_scale,
                                                        1)[0]
        else:
            num_steps = int((self.max_scale - self.min_scale) / self.step + 1)
            scale_factors = np.linspace(self.min_scale,
                                        self.max_scale,
                                        num_steps)
            np.random.shuffle(scale_factors)
            self.random_scale = scale_factors[0]

        image, label = self.scale(image, label, self.random_scale)
        return image,label
        
def main():
    image = cv2.imread('./work/dummy_data/JPEGImages/2008_000064.jpg')
    label = cv2.imread('./work/dummy_data/GroundTruth_trainval_png/2008_000064.png')

    # TODO: crop_size
    # TODO: Transform: RandomSacle, RandomFlip, Pad, RandomCrop
    crop_size = 200
    augment = Compose([
        RandomScale(),
        RandomFlip(),
        Pad(crop_size, mean_val=[0.485, 0.456, 0.406]),
        RandomCrop(crop_size),
        ConvertDataType(),
        # Normalize(0, 1)
        ])
    # for i in range(10):
        # TODO: call transform
        # TODO: save image
    new_img, new_label = augment(image,label)
    cv2.imwrite('img_new.png', new_img)
    cv2.imwrite('label_new.png', new_label)


if __name__ == "__main__":
    main()

4. basic_data_preprocessing.py

import basic_transforms as t

class TrainAugmentation():
    def __init__(self, image_size, mean_val=0, std_val=1.0):
        #TODO: add self.augment, which contains
        # random scale, pad, random crop, random flip, convert data type, and normalize ops
        self.image_size = image_size
        self.mean_val = mean_val
        self.std_val = std_val
    def __call__(self, image, label):
        self.augment = t.Compose([
            t.RandomScale(),
            t.RandomFlip(),
            #t.Pad(self.image_size, self.mean_val),
            #t.RandomCrop(self.image_size),
            t.ConvertDataType(),
            #t.Normalize(0, 1)
            ])
        
        return self.augment(image, label)

5. fcn8s.py

import numpy as np
import paddle.fluid as fluid
from paddle.fluid.dygraph import to_variable
from paddle.fluid.dygraph import Conv2D
from paddle.fluid.dygraph import Conv2DTranspose
from paddle.fluid.dygraph import Dropout
from paddle.fluid.dygraph import Pool2D
from vgg import VGG16BN


class FCN8s(fluid.dygraph.Layer):
 # TODO: create fcn8s model
    def __init__(self, num_classes=59):
        super(FCN8s, self).__init__() # 初始化父类
        backbone = VGG16BN(pretrained=False)
        
        self.layer1 = backbone.layer1
        self.layer1[0].conv._padding = [100,100]  # 官方FCN设计上的巧妙,要多加padding
        self.pool1 = Pool2D(pool_size=2, pool_stride=2, ceil_mode=True) # 定义pooling层
        self.layer2 = backbone.layer2
        self.pool2 = Pool2D(pool_size=2, pool_stride=2, ceil_mode=True)      
        self.layer3 = backbone.layer3
        self.pool3 = Pool2D(pool_size=2, pool_stride=2, ceil_mode=True) 
        self.layer4 = backbone.layer4
        self.pool4 = Pool2D(pool_size=2, pool_stride=2, ceil_mode=True) 
        self.layer5 = backbone.layer5
        self.pool5 = Pool2D(pool_size=2, pool_stride=2, ceil_mode=True) 

        # convolution 7×7
        self.fc6 = Conv2D(512, 4096, 7, act='relu')
        self.fc7 = Conv2D(4096, 4096, 1, act='relu')
        self.drop6 = Dropout()
        self.drop7 = Dropout()

        # score是把feature map变成和分割图一样的类数
        self.score = Conv2D(4096, num_classes, 1)
        self.score_pool3 = Conv2D(256, num_classes, 1)
        self.score_pool4 = Conv2D(512, num_classes, 1)

        # 上采样(2倍、2倍、8倍)
        # 2倍
        self.up_output = Conv2DTranspose(num_channels=num_classes,
                                         num_filters=num_classes,
                                         filter_size=4,
                                         stride=2,
                                         bias_attr=False)
        # 2倍
        self.up_pool4 = Conv2DTranspose(num_channels=num_classes,
                                         num_filters=num_classes,
                                         filter_size=4,
                                         stride=2,
                                         bias_attr=False)
        # 8倍
        self.up_final = Conv2DTranspose(num_channels=num_classes,
                                         num_filters=num_classes,
                                         filter_size=16,
                                         stride=8,
                                         bias_attr=False)
    def forward(self, inputs):
        x = self.layer1(inputs) # 1/2
        x = self.pool1(x)
        x = self.layer2(x)  # 1/4
        x = self.pool2(x)
        x = self.layer3(x)  # 1/8
        x = self.pool3(x)
        pool3 = x
        x = self.layer4(x)  # 1/16
        x = self.pool4(x)
        pool4 = x
        x = self.layer5(x)  # 1/32
        x = self.pool5(x)

        x = self.fc6(x)
        x = self.drop6(x)
        x = self.fc7(x)
        x = self.drop7(x)

        x = self.score(x)       # 分割图按ol类别数的1×1卷积
        x = self.up_output(x)   # 上采样2倍 
        up_output = x           # 1/16       
        x = self.score_pool4(pool4) # 和分割类别数一样的feature map
        
        # 相加之前做padding, 5、9、31是根据论文的,0也可以,为了让模型的尺寸一样
        x = x[:, :, 5:5+up_output.shape[2], 5:5+up_output.shape[3]]
        
        up_pool4 = x
        x = up_pool4 + up_output

        x = self.up_pool4(x)
        up_pool4 = x

        x = self.score_pool3(pool3)
        x = x[:, :, 9:9+up_pool4.shape[2], 9:9+up_pool4.shape[3]]

        up_pool3 = x # 1/8

        x = up_pool3 + up_pool4

        x = self.up_final(x)

        x = x[:, :, 31:31+inputs.shape[2], 31:31+inputs.shape[3]]

        return x

6. basic_seg_loss.py

import paddle
import paddle.fluid as fluid
import numpy as np
import cv2

eps = 1e-8

def Basic_SegLoss(preds, labels, ignore_index=255):
    n, c, h, w = preds.shape
    print(preds.shape)
    print(labels.shape)
    # TODO: create softmax_with_cross_entropy criterion
    loss = fluid.layers.softmax_with_cross_entropy(preds, labels,axis=1) 

    # TODO: transpose preds to NxHxWxC, NCHW -> NHWC

    
    mask = labels!=ignore_index
    mask = fluid.layers.cast(mask, 'float32')

    # TODO: call criterion and compute loss
    loss = loss * mask
    avg_loss = fluid.layers.mean(loss) / (fluid.layers.mean(mask) + eps)

    return avg_loss

def main():
    label = cv2.imread('./work/dummy_data/GroundTruth_trainval_png/2008_000007.png')
    label = cv2.cvtColor(label, cv2.COLOR_BGR2GRAY).astype(np.int64)
    pred = np.random.uniform(0, 1, (1, 59, label.shape[0], label.shape[1])).astype(np.float32)
    label = label[np.newaxis,:,:]
    label = label[np.newaxis, :, :, :]

    with fluid.dygraph.guard(fluid.CPUPlace()):
        pred = fluid.dygraph.to_variable(pred)
        label = fluid.dygraph.to_variable(label)
        loss = Basic_SegLoss(pred, label)
        print(loss)

if __name__ == "__main__":
    main()

7. basic_train.py

import os
import paddle
import paddle.fluid as fluid
from paddle.fluid.optimizer import AdamOptimizer
import numpy as np
import cv2
import argparse
from utils import AverageMeter
from basic_seg_loss import Basic_SegLoss
from basic_data_preprocessing import TrainAugmentation
from fcn8s import  FCN8s

parser = argparse.ArgumentParser()
parser.add_argument('--net', type=str, default='basic')
parser.add_argument('--lr', type=float, default=0.001)
parser.add_argument('--num_epochs', type=int, default=10)
parser.add_argument('--batch_size', type=int, default=1)
parser.add_argument('--image_folder', type=str, default='./work/dummy_data')
parser.add_argument('--image_list_file', type=str, default='./work/dummy_data/list.txt')
parser.add_argument('--checkpoint_folder', type=str, default='./output')
parser.add_argument('--save_freq', type=int, default=2)


args = parser.parse_args()

def train(dataloader, model, criterion, optimizer, epoch, basic_augmentation):
    model.train()
    train_loss_meter = AverageMeter()
    for batch_id, datas in enumerate(dataloader()):
        #TODO:
        imgs = [fluid.dygraph.to_variable(_) for _ in datas[0]]
        imgs = fluid.layers.concat(imgs, axis=0)
        labels = [fluid.dygraph.to_variable(_) for _ in datas[1]]
        labels = fluid.layers.concat(labels, axis=0)
        out = model(imgs)
        loss = criterion(out, labels)
        loss.backward()
        optimizer.minimize(loss)
        optimizer.clear_gradients()
        n = imgs.shape[0]
        train_loss_meter.update(loss.numpy()[0], n)
        print(f"Epoch[{epoch:03d}/{args.num_epochs:03d}], " +
                f"Step[{batch_id:04d}, " +
                f"Average Loss: {train_loss_meter.avg:4f}")

    return train_loss_meter.avg

def train_dataloader(batch_size):
    # 数据读取
    with open(args.image_list_file, 'r') as f:
        train_data = [line.strip() for line in f.readlines()]
    
    def reader():
        index = np.arange(len(train_data))
        mask = np.random.choice(index, batch_size, replace = False)
        imgs = []
        labels = []
        for indexs in mask:
            img_path, label_path = train_data[indexs].split()
            img_path = os.path.join(args.image_folder, img_path)
            label_path = os.path.join(args.image_folder, label_path)

            # read img
            img = cv2.imread(img_path)
            img = cv2.resize(img, (512, 512), cv2.INTER_NEAREST)
            # HWC to CHW
            if len(img.shape) == 3:
                img = np.transpose(img, (2,0,1))
            # 归一化
            img = np.expand_dims(img, axis=0).astype('float32')

            # read label
            label = cv2.imread(label_path).astype('float32')
            label = cv2.resize(label, (512, 512), cv2.INTER_NEAREST)
            label = cv2.cvtColor(label, cv2.COLOR_BGR2GRAY)
            # HWC to CHW
            if len(label.shape) == 3:
                label = np.transpose(label, (2,0,1))
            # 归一化
            label = np.expand_dims(label, axis=0)
            label = np.expand_dims(label, axis=0).astype('int64')
            assert label.shape[2:] == img.shape[2:],'Error'

            imgs.append(img)
            labels.append(label)
        assert len(labels) == len(mask), 'Error'

        yield imgs, labels
    
    return reader



def main():
    # Step 0: preparation
    place = paddle.fluid.CPUPlace()
    with fluid.dygraph.guard(place):
        # Step 1: Define training dataloader
        basic_augmentation = TrainAugmentation(image_size=256)
        #TODO: create dataloader
        train_reader = train_dataloader(args.batch_size)
        # Step 2: Create model
        if args.net == "basic":
            #TODO: create basicmodel
            model = FCN8s(num_classes=59)
        else:
            raise NotImplementedError(f"args.net: {args.net} is not Supported!")

        # Step 3: Define criterion and optimizer
        criterion = Basic_SegLoss

        # create optimizer
        optimizer = AdamOptimizer(learning_rate=args.lr, parameter_list=model.parameters())

        # Step 4: Training
        for epoch in range(1, args.num_epochs+1):
            train_loss = train(train_reader,
                               model,
                               criterion,
                               optimizer,
                               epoch,
                               basic_augmentation)
            print(f"----- Epoch[{epoch}/{args.num_epochs}] Train Loss: {train_loss:.4f}")

            if epoch % args.save_freq == 0 or epoch == args.num_epochs:
                model_path = os.path.join(args.checkpoint_folder, f"{args.net}-Epoch-{epoch}-Loss-{train_loss}")

                # TODO: save model and optmizer states
                fluid.save_dygraph(model.state_dict(), 'save_model_state_dict')
                fluid.save_dygraph(optimizer.state_dict(), 'save_optimizer_state_dict')

                print(f'----- Save model: {model_path}.pdparams')
                print(f'----- Save optimizer: {model_path}.pdopt')


if __name__ == "__main__":
    main()

结果:

aistudio@jupyter-559108-2495737:~$ python ./work/basic_train.py 
[1, 59, 512, 512]
[1, 1, 512, 512]
Epoch[001/010], Step[0000, Average Loss: 4.101622
----- Epoch[1/10] Train Loss: 4.1016
[1, 59, 512, 512]
[1, 1, 512, 512]
Epoch[002/010], Step[0000, Average Loss: 4.543366
----- Epoch[2/10] Train Loss: 4.5434
...
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